Oesophagus

Perpendicular 

As there are no English words starting with Q that have E as the second letter when spelled correctly I have posted the next best thing, which is an abbreviation:

 

QE2

Relay

seeping

Trepanning

Sorry ignore previous post, it's not right

*walking in and not looking around* Smiley LOL

 

Terminated

Most of us have posted an erroneous answer at some point.  Don't worry about it.

 

U.E.F.A  (Okay, I know it's not a word as such, but I can't think of any English words starting with U that have E for the second letter when spelled correctly.)

Venison

West

Xenon

Yellow

Zero

Aeroplane

Beneath

Cerise

Dentistry

eerie

Fermenting